Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83633.1 | AEF84674.1 | TREPR_2921 | TREPR_2111 | Putative LysM domain protein; Identified by match to protein family HMM PF01476. | OmpA; Identified by match to protein family HMM PF00691. | 0.561 |
| AEF83633.1 | AEF86745.1 | TREPR_2921 | TREPR_3648 | Putative LysM domain protein; Identified by match to protein family HMM PF01476. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.864 |
| AEF83633.1 | AEF86947.1 | TREPR_2921 | TREPR_2927 | Putative LysM domain protein; Identified by match to protein family HMM PF01476. | Putative ankyrin; Identified by match to protein family HMM PF00023. | 0.501 |
| AEF84385.1 | AEF84674.1 | TREPR_2860 | TREPR_2111 | Chemotaxis protein MotB; Identified by match to protein family HMM PF00691. | OmpA; Identified by match to protein family HMM PF00691. | 0.618 |
| AEF84385.1 | AEF86198.1 | TREPR_2860 | TREPR_2863 | Chemotaxis protein MotB; Identified by match to protein family HMM PF00691. | Flagellar hook protein FlgE; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559; match to protein family HMM TIGR03506. | 0.940 |
| AEF84659.1 | AEF84674.1 | TREPR_2631 | TREPR_2111 | Cationic outer membrane protein; Identified by match to protein family HMM PF03938. | OmpA; Identified by match to protein family HMM PF00691. | 0.432 |
| AEF84674.1 | AEF83633.1 | TREPR_2111 | TREPR_2921 | OmpA; Identified by match to protein family HMM PF00691. | Putative LysM domain protein; Identified by match to protein family HMM PF01476. | 0.561 |
| AEF84674.1 | AEF84385.1 | TREPR_2111 | TREPR_2860 | OmpA; Identified by match to protein family HMM PF00691. | Chemotaxis protein MotB; Identified by match to protein family HMM PF00691. | 0.618 |
| AEF84674.1 | AEF84659.1 | TREPR_2111 | TREPR_2631 | OmpA; Identified by match to protein family HMM PF00691. | Cationic outer membrane protein; Identified by match to protein family HMM PF03938. | 0.432 |
| AEF84674.1 | AEF85015.1 | TREPR_2111 | TREPR_1535 | OmpA; Identified by match to protein family HMM PF00691. | Transglycosylase, SLT family; Identified by match to protein family HMM PF01464; match to protein family HMM PF01476. | 0.475 |
| AEF84674.1 | AEF85963.1 | TREPR_2111 | TREPR_3401 | OmpA; Identified by match to protein family HMM PF00691. | Putative trep. | 0.604 |
| AEF84674.1 | AEF86198.1 | TREPR_2111 | TREPR_2863 | OmpA; Identified by match to protein family HMM PF00691. | Flagellar hook protein FlgE; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559; match to protein family HMM TIGR03506. | 0.754 |
| AEF84674.1 | AEF86504.1 | TREPR_2111 | TREPR_0748 | OmpA; Identified by match to protein family HMM PF00691. | Identified by match to protein family HMM PF03372. | 0.451 |
| AEF84674.1 | AEF86745.1 | TREPR_2111 | TREPR_3648 | OmpA; Identified by match to protein family HMM PF00691. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.468 |
| AEF84674.1 | AEF86947.1 | TREPR_2111 | TREPR_2927 | OmpA; Identified by match to protein family HMM PF00691. | Putative ankyrin; Identified by match to protein family HMM PF00023. | 0.416 |
| AEF84674.1 | AEF87007.1 | TREPR_2111 | TREPR_2836 | OmpA; Identified by match to protein family HMM PF00691. | Cell surface protein. | 0.428 |
| AEF85015.1 | AEF84674.1 | TREPR_1535 | TREPR_2111 | Transglycosylase, SLT family; Identified by match to protein family HMM PF01464; match to protein family HMM PF01476. | OmpA; Identified by match to protein family HMM PF00691. | 0.475 |
| AEF85963.1 | AEF84674.1 | TREPR_3401 | TREPR_2111 | Putative trep. | OmpA; Identified by match to protein family HMM PF00691. | 0.604 |
| AEF86198.1 | AEF84385.1 | TREPR_2863 | TREPR_2860 | Flagellar hook protein FlgE; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559; match to protein family HMM TIGR03506. | Chemotaxis protein MotB; Identified by match to protein family HMM PF00691. | 0.940 |
| AEF86198.1 | AEF84674.1 | TREPR_2863 | TREPR_2111 | Flagellar hook protein FlgE; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM PF07559; match to protein family HMM TIGR03506. | OmpA; Identified by match to protein family HMM PF00691. | 0.754 |
page 1 of 2