Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84249.1 | AEF84751.1 | TREPR_2126 | TREPR_2122 | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | 0.439 |
| AEF84249.1 | AEF84992.1 | TREPR_2126 | TREPR_2123 | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Nucleotidyltransferase substrate binding-like protein; Identified by match to protein family HMM PF08780. | 0.439 |
| AEF84249.1 | AEF85221.1 | TREPR_2126 | TREPR_2125 | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842. | 0.943 |
| AEF84249.1 | glgA | TREPR_2126 | TREPR_2124 | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.552 |
| AEF84751.1 | AEF84249.1 | TREPR_2122 | TREPR_2126 | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.439 |
| AEF84751.1 | AEF84992.1 | TREPR_2122 | TREPR_2123 | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | Nucleotidyltransferase substrate binding-like protein; Identified by match to protein family HMM PF08780. | 0.945 |
| AEF84751.1 | AEF85221.1 | TREPR_2122 | TREPR_2125 | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842. | 0.445 |
| AEF84751.1 | AEF85320.1 | TREPR_2122 | TREPR_2182 | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | Conserved hypothetical protein. | 0.438 |
| AEF84751.1 | glgA | TREPR_2122 | TREPR_2124 | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.601 |
| AEF84992.1 | AEF84249.1 | TREPR_2123 | TREPR_2126 | Nucleotidyltransferase substrate binding-like protein; Identified by match to protein family HMM PF08780. | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.439 |
| AEF84992.1 | AEF84751.1 | TREPR_2123 | TREPR_2122 | Nucleotidyltransferase substrate binding-like protein; Identified by match to protein family HMM PF08780. | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | 0.945 |
| AEF84992.1 | AEF85221.1 | TREPR_2123 | TREPR_2125 | Nucleotidyltransferase substrate binding-like protein; Identified by match to protein family HMM PF08780. | Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842. | 0.445 |
| AEF84992.1 | glgA | TREPR_2123 | TREPR_2124 | Nucleotidyltransferase substrate binding-like protein; Identified by match to protein family HMM PF08780. | Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.601 |
| AEF85221.1 | AEF84249.1 | TREPR_2125 | TREPR_2126 | Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842. | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.943 |
| AEF85221.1 | AEF84751.1 | TREPR_2125 | TREPR_2122 | Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842. | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | 0.445 |
| AEF85221.1 | AEF84992.1 | TREPR_2125 | TREPR_2123 | Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842. | Nucleotidyltransferase substrate binding-like protein; Identified by match to protein family HMM PF08780. | 0.445 |
| AEF85221.1 | glgA | TREPR_2125 | TREPR_2124 | Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842. | Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.559 |
| AEF85320.1 | AEF84751.1 | TREPR_2182 | TREPR_2122 | Conserved hypothetical protein. | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | 0.438 |
| glgA | AEF84249.1 | TREPR_2124 | TREPR_2126 | Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). | 0.552 |
| glgA | AEF84751.1 | TREPR_2124 | TREPR_2122 | Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose. | DNA polymerase beta domain protein region; Identified by match to protein family HMM PF01909. | 0.601 |
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