STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84249.1Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (433 aa)    
Predicted Functional Partners:
AEF85221.1
Amino acid-binding ACT domain protein; Identified by match to protein family HMM PF01842.
 
   0.943
AEF86069.1
Phenylacetate-coenzyme A ligase (Phenylacetyl-CoAligase) (PA-CoA ligase); Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
  
 
0.924
AEF83742.1
Indolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.632
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.623
glgA
Glycogen synthase (Starch [bacterial glycogen]synthase); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
       0.552
AEF84840.1
Indolepyruvate ferredoxin oxidoreductase, beta subunit; Identified by match to protein family HMM PF01558.
 
    0.550
AEF86332.1
Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.531
AEF85379.1
Dipeptide transport ATP-binding protein DppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.531
AEF84652.1
Oligopeptide transport system permease protein AppC; Identified by match to protein family HMM PF00528.
       0.531
AEF84979.1
Oligopeptide transport system permease protein AppB; Identified by match to protein family HMM PF00528.
       0.524
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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