STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86693.1Conserved hypothetical protein. (498 aa)    
Predicted Functional Partners:
AEF83934.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.836
AEF84627.1
Putative lipoprotein.
 
     0.819
trxB
Thioredoxin-disulfide reductase; Identified by match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01292.
  
 
 0.778
AEF86083.1
Conserved hypothetical protein.
 
    
0.757
AEF86045.1
Identified by match to protein family HMM PF00485.
   
 
 0.746
AEF84628.1
Putative lipoprotein.
 
     0.695
AEF85461.1
Taurine ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    0.694
AEF86704.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
     0.622
AEF86221.1
Taurine import ATP-binding protein TauB; Identified by match to protein family HMM PF00005.
 
   0.613
gltB
Glutamate synthase, large subunit; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
   
 
 0.541
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.