Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
AEF85461.1Taurine ABC transporter, permease protein; Identified by match to protein family HMM PF00528. (255 aa)    
Predicted Functional Partners:
AEF86221.1
Taurine import ATP-binding protein TauB; Identified by match to protein family HMM PF00005.
 
 
 0.977
AEF84627.1
Putative lipoprotein.
 
 
 0.936
AEF83934.1
Hypothetical protein; Identified by glimmer; putative.
 
 
 0.935
AEF84628.1
Putative lipoprotein.
 
 
 0.929
AEF84420.1
Nitrate transport ATP-binding protein NrtC; Identified by match to protein family HMM PF00005.
 
 
 0.923
AEF85804.1
Taurine import ATP-binding protein TauB; Identified by match to protein family HMM PF00005.
 
 
 0.916
AEF86278.1
Putative lipoprotein.
 
 
 0.909
AEF85281.1
Aliphatic sulfonates import ATP-binding protein SsuB 1; Identified by match to protein family HMM PF00005.
 
 
 0.892
AEF84145.1
ABC transporter component A.
 
 
 0.839
AEF86704.1
Radical SAM domain protein; Identified by match to protein family HMM PF04055.
 
     0.825
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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