STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86704.1Radical SAM domain protein; Identified by match to protein family HMM PF04055. (406 aa)    
Predicted Functional Partners:
AEF86221.1
Taurine import ATP-binding protein TauB; Identified by match to protein family HMM PF00005.
 
     0.836
AEF85461.1
Taurine ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
     0.825
AEF84627.1
Putative lipoprotein.
 
     0.824
AEF84628.1
Putative lipoprotein.
 
     0.812
AEF83934.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.739
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
  
  
 0.679
AEF86278.1
Putative lipoprotein.
 
     0.674
AEF86693.1
Conserved hypothetical protein.
 
     0.622
AEF86083.1
Conserved hypothetical protein.
 
     0.616
bioW
6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP.
  
  
 0.615
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.