STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86740.1HD domain protein; Identified by match to protein family HMM PF01966. (388 aa)    
Predicted Functional Partners:
AEF84853.1
Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 0.805
AEF85119.1
Hypothetical protein; Identified by glimmer; putative.
 
 
 0.794
AEF86005.1
GAF domain/HD domain protein; Identified by match to protein family HMM PF01590; match to protein family HMM PF01966.
 
   
 0.792
AEF86719.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471.
   
   0.786
AEF85021.1
Putative signaling protein; Identified by match to protein family HMM PF00672; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 
 0.749
AEF86874.1
GGDEF/EAL/PAS/PAC domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 
 0.745
AEF86400.1
Ggdef domain/hd domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
 
 
 0.735
AEF86329.1
Putative signaling protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 
 0.714
AEF83800.1
Putative signaling protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254.
  
 
 0.673
AEF85698.1
Sensor protein GacS; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
   
 0.520
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.