Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEF84842.1Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (265 aa)    
Predicted Functional Partners:
AEF86527.1
Hypothetical protein; Identified by glimmer; putative.
       0.718
AEF83770.1
4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037.
       0.718
AEF86709.1
Hypothetical protein; Identified by glimmer; putative.
  
    0.648
tpx
Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.
   
    0.613
AEF83731.1
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
 
   
 0.599
AEF86225.1
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
  
   
 0.507
AEF84730.1
Hypothetical protein; Identified by glimmer; putative.
   
    0.506
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.468
AEF86680.1
Putative flagellin FlaG; Identified by match to protein family HMM PF03646.
    
   0.460
AEF86893.1
Putative lipoprotein.
   
    0.446
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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