STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83770.14Fe-4S binding domain protein; Identified by match to protein family HMM PF00037. (273 aa)    
Predicted Functional Partners:
AEF86527.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF85325.1
Putative 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Identified by match to protein family HMM PF00037.
  
     0.753
AEF84842.1
Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.718
AEF83731.1
Transcriptional regulator, TetR family; Identified by match to protein family HMM PF00440.
       0.547
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
     
 0.466
AEF83741.1
Multimeric flavodoxin; Identified by match to protein family HMM PF03358.
  
     0.464
AEF84924.1
Hypothetical protein; Identified by glimmer; putative.
       0.441
AEF86210.1
Flavin reductase; Identified by match to protein family HMM PF03358.
  
     0.404
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.