STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86605.1Serine-type D-Ala-D-Ala carboxypeptidase DacC; Identified by match to protein family HMM PF00768; match to protein family HMM PF07943; Belongs to the peptidase S11 family. (439 aa)    
Predicted Functional Partners:
AEF84147.1
Penicillin-binding protein 1A; Identified by match to protein family HMM PF00905; match to protein family HMM PF00912; match to protein family HMM TIGR02074.
  
  
 0.929
AEF83871.1
Carboxypeptidase; Identified by match to protein family HMM PF02557.
     
 0.917
asnS
asparagine--tRNA ligase; Identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00457.
  
    0.794
AEF84858.1
Putative pyrogenic exotoxin B; Identified by match to protein family HMM PF01640.
  
  
 0.518
AEF83606.1
Putative cell division protein FtsQ; Essential cell division protein.
 
   
 0.473
AEF86918.1
Identified by match to protein family HMM PF01580; match to protein family HMM PF09397; Belongs to the FtsK/SpoIIIE/SftA family.
 
   
 0.456
AEF85522.1
GMP synthase (glutamine-hydrolyzing); Identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888.
  
  
 0.447
AEF84097.1
Stage V sporulation protein E; Identified by match to protein family HMM PF01098; Belongs to the SEDS family.
 
   
 0.416
AEF84112.1
Hydrolase, TatD family; Identified by match to protein family HMM PF01026.
  
    0.413
tig
Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
    0.412
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.