STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85996.1Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229. (406 aa)    
Predicted Functional Partners:
AEF84051.1
Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728.
 
 0.953
AEF84752.1
Two-component hybrid sensor and regulator; Identified by match to protein family HMM PF00072.
 
 
 0.901
AEF84382.1
Putative response regulator; Identified by match to protein family HMM PF00072.
 
 
 0.855
AEF86334.1
Chemotaxis protein Chey; Identified by match to protein family HMM PF00072.
 
     0.692
AEF86054.1
Sigma-54 dependent transcriptional regulator/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.
 
 
 0.666
AEF85803.1
MmoS; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF02743.
 
 
0.646
AEF84044.1
Signal transduction histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
 
 
 0.641
AEF84031.1
Nitrogen assimilation regulatory protein NtrX; Identified by match to protein family HMM PF00072; match to protein family HMM PF00158; match to protein family HMM PF02954.
 
 
 0.635
AEF86533.1
Two component transcriptional regulator, winged helix family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
 
 
 0.630
AEF86370.1
Hpt sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518.
 
 
 0.627
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.