Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83944.1 | AEF83946.1 | TREPR_2739 | TREPR_0900 | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | AAA ATPase. | 0.825 |
| AEF83944.1 | AEF84308.1 | TREPR_2739 | TREPR_2282 | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Hypothetical protein; Identified by glimmer; putative. | 0.892 |
| AEF83944.1 | AEF84892.1 | TREPR_2739 | TREPR_0948 | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Conserved hypothetical protein; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313. | 0.810 |
| AEF83944.1 | AEF85070.1 | TREPR_2739 | TREPR_2281 | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Putative DNA-binding protein. | 0.582 |
| AEF83944.1 | AEF85171.1 | TREPR_2739 | TREPR_0824 | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Type I restriction modification system M subunit; Identified by match to protein family HMM PF02384. | 0.725 |
| AEF83944.1 | AEF86250.1 | TREPR_2739 | TREPR_2734 | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | putatIve type i restriction enzyme hindviip m protein (m.hindviip); Identified by match to protein family HMM PF02384. | 0.935 |
| AEF83944.1 | AEF86264.1 | TREPR_2739 | TREPR_2283 | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | Type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384. | 0.935 |
| AEF83946.1 | AEF83944.1 | TREPR_0900 | TREPR_2739 | AAA ATPase. | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.825 |
| AEF83946.1 | AEF84308.1 | TREPR_0900 | TREPR_2282 | AAA ATPase. | Hypothetical protein; Identified by glimmer; putative. | 0.637 |
| AEF83946.1 | AEF84892.1 | TREPR_0900 | TREPR_0948 | AAA ATPase. | Conserved hypothetical protein; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313. | 0.823 |
| AEF83946.1 | AEF85171.1 | TREPR_0900 | TREPR_0824 | AAA ATPase. | Type I restriction modification system M subunit; Identified by match to protein family HMM PF02384. | 0.425 |
| AEF83946.1 | AEF85850.1 | TREPR_0900 | TREPR_2280 | AAA ATPase. | HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.826 |
| AEF83946.1 | AEF86250.1 | TREPR_0900 | TREPR_2734 | AAA ATPase. | putatIve type i restriction enzyme hindviip m protein (m.hindviip); Identified by match to protein family HMM PF02384. | 0.499 |
| AEF83946.1 | AEF86264.1 | TREPR_0900 | TREPR_2283 | AAA ATPase. | Type I restriction-modification system, M subunit; Identified by match to protein family HMM PF02384. | 0.499 |
| AEF84308.1 | AEF83944.1 | TREPR_2282 | TREPR_2739 | Hypothetical protein; Identified by glimmer; putative. | putatIve type i restriction enzyme hindviip r protein; Subunit R is required for both nuclease and ATPase activities, but not for modification. | 0.892 |
| AEF84308.1 | AEF83946.1 | TREPR_2282 | TREPR_0900 | Hypothetical protein; Identified by glimmer; putative. | AAA ATPase. | 0.637 |
| AEF84308.1 | AEF84892.1 | TREPR_2282 | TREPR_0948 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF02384; match to protein family HMM PF04313. | 0.610 |
| AEF84308.1 | AEF85070.1 | TREPR_2282 | TREPR_2281 | Hypothetical protein; Identified by glimmer; putative. | Putative DNA-binding protein. | 0.857 |
| AEF84308.1 | AEF85171.1 | TREPR_2282 | TREPR_0824 | Hypothetical protein; Identified by glimmer; putative. | Type I restriction modification system M subunit; Identified by match to protein family HMM PF02384. | 0.594 |
| AEF84308.1 | AEF85539.1 | TREPR_2282 | TREPR_2279 | Hypothetical protein; Identified by glimmer; putative. | Conserved hypothetical protein. | 0.777 |
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