Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84078.1 | AEF84103.1 | TREPR_2303 | TREPR_2509 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.551 |
| AEF84078.1 | AEF84178.1 | TREPR_2303 | TREPR_2988 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.539 |
| AEF84078.1 | AEF84406.1 | TREPR_2303 | TREPR_3327 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Sugar permease; Identified by match to protein family HMM PF00528. | 0.547 |
| AEF84078.1 | AEF84772.1 | TREPR_2303 | TREPR_1975 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.521 |
| AEF84078.1 | AEF85036.1 | TREPR_2303 | TREPR_2304 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Hypothetical protein; Identified by glimmer; putative. | 0.527 |
| AEF84078.1 | AEF85535.1 | TREPR_2303 | TREPR_1528 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.521 |
| AEF84078.1 | AEF85667.1 | TREPR_2303 | TREPR_0108 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Multiple sugar-binding transport ATP-binding protein MsmK; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.521 |
| AEF84078.1 | AEF86284.1 | TREPR_2303 | TREPR_3844 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.537 |
| AEF84078.1 | AEF86696.1 | TREPR_2303 | TREPR_2508 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.545 |
| AEF84078.1 | AEF86954.1 | TREPR_2303 | TREPR_2302 | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | Transcriptional regulator, LuxR family protein; Identified by match to protein family HMM PF00196. | 0.820 |
| AEF84103.1 | AEF84078.1 | TREPR_2509 | TREPR_2303 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.551 |
| AEF84103.1 | AEF84178.1 | TREPR_2509 | TREPR_2988 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84103.1 | AEF84772.1 | TREPR_2509 | TREPR_1975 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.747 |
| AEF84103.1 | AEF85535.1 | TREPR_2509 | TREPR_1528 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Tobe domain family; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.742 |
| AEF84103.1 | AEF85667.1 | TREPR_2509 | TREPR_0108 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Multiple sugar-binding transport ATP-binding protein MsmK; Identified by match to protein family HMM PF00005; match to protein family HMM PF08402; Belongs to the ABC transporter superfamily. | 0.894 |
| AEF84103.1 | AEF86284.1 | TREPR_2509 | TREPR_3844 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.883 |
| AEF84103.1 | AEF86696.1 | TREPR_2509 | TREPR_2508 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar ABC transporter permease; Identified by match to protein family HMM PF00528. | 0.972 |
| AEF84178.1 | AEF84078.1 | TREPR_2988 | TREPR_2303 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547. | 0.539 |
| AEF84178.1 | AEF84103.1 | TREPR_2988 | TREPR_2509 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | 0.884 |
| AEF84178.1 | AEF84406.1 | TREPR_2988 | TREPR_3327 | ABC transporter, permease protein; Identified by match to protein family HMM PF00528. | Sugar permease; Identified by match to protein family HMM PF00528. | 0.884 |
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