STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86230.1Identified by match to protein family HMM PF01061. (266 aa)    
Predicted Functional Partners:
AEF83702.1
Daunorubicin resistance ATP-binding protein DrrA; Identified by match to protein family HMM PF00005.
 
  
 0.982
AEF85510.1
Conserved hypothetical protein.
       0.773
AEF86999.1
Caax amino protease family; Identified by match to protein family HMM PF02517.
  
  
 0.735
AEF83851.1
ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005.
  
  
 0.686
AEF84508.1
Identified by match to protein family HMM PF00881.
 
  
 0.655
AEF85582.1
Nitroreductase; Identified by match to protein family HMM PF00881.
 
  
 0.640
AEF86534.1
6,7-dihydropteridine reductase; Identified by match to protein family HMM PF00881.
  
  
 0.585
AEF85622.1
Identified by match to protein family HMM PF00881.
  
  
 0.585
AEF84034.1
Nitroreductase; Identified by match to protein family HMM PF00881.
  
  
 0.585
AEF86538.1
Putative NADH dehydrogenase/nad(p)h nitroreductase; Identified by match to protein family HMM PF00881.
  
  
 0.585
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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