STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86261.1ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (426 aa)    
Predicted Functional Partners:
AEF84641.1
ABC transporter, permease protein; Identified by match to protein family HMM PF01061.
 
 0.998
AEF86825.1
O-antigen export system permease protein RfbA; Identified by match to protein family HMM PF01061.
 
 0.997
AEF86126.1
Teichoic acids export ATP-binding protein TagH (Teichoicacid-transporting ATPase); Identified by match to protein family HMM PF00005.
  
  
 
0.907
AEF83713.1
Hypothetical protein; Identified by glimmer; putative.
 
     0.797
rfbG
CDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR02622.
  
  
 0.776
rfbF
Glucose-1-phosphate cytidylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02623.
     
 0.775
AEF84888.1
DegT/DnrJ/EryC1/StrS aminotransferase; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.774
AEF84551.1
Phosphoenolpyruvate mutase; Identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR02320.
     
 0.634
AEF86776.1
Putative lipopolysaccharide biosynthesis; Identified by match to protein family HMM PF02706.
  
  
 0.617
AEF83794.1
Putative lipopolysaccharide biosynthesis protein.
  
  
 0.617
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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