STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbFGlucose-1-phosphate cytidylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02623. (260 aa)    
Predicted Functional Partners:
rfbG
CDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR02622.
 
 0.997
AEF84888.1
DegT/DnrJ/EryC1/StrS aminotransferase; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.958
AEF85659.1
Putative phosphomannomutase; Identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880.
  
 
 0.944
AEF85696.1
Identified by match to protein family HMM PF02878.
  
 
 0.944
AEF84120.1
UDP-glucuronate 5'-epimerase (UDP-glucuronic acidepimerase); Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
  
 0.938
selB
Selenocysteine-specific translation elongation factor; Identified by match to protein family HMM PF00009; match to protein family HMM PF03144; match to protein family HMM PF09107; match to protein family HMM TIGR00231; match to protein family HMM TIGR00475.
    
 0.937
malP
Maltodextrin phosphorylase; Identified by match to protein family HMM PF00343; match to protein family HMM TIGR02094.
  
 0.927
malQ
4-alpha-glucanotransferase; Identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217.
    
 0.911
AEF85120.1
4-alpha-glucanotransferase (Amylomaltase)(Disproportionating enzyme) (D-enzyme); Identified by match to protein family HMM PF02446.
    
 0.911
AEF86734.1
Alpha-amylase; Identified by match to protein family HMM PF03065.
    
 0.910
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.