STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84575.1Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535. (576 aa)    
Predicted Functional Partners:
AEF86428.1
Undecaprenyl-phosphate galactose phosphotransferase; Identified by match to protein family HMM PF02397; match to protein family HMM TIGR03022; match to protein family HMM TIGR03025.
  
  
 0.618
AEF84888.1
DegT/DnrJ/EryC1/StrS aminotransferase; Identified by match to protein family HMM PF01041; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.616
AEF85343.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Identified by match to protein family HMM PF00908.
  
    0.571
AEF86358.1
Paratose synthase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370.
  
  
 0.556
AEF86703.1
Nucleotide-diphospho-sugar transferase domain protein; Identified by match to protein family HMM PF00132.
 
    
0.544
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.462
rfbF
Glucose-1-phosphate cytidylyltransferase; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR02623.
  
  
 0.446
rfbG
CDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR02622.
  
  
 0.429
AEF86261.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
     
 0.425
rfbD
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.420
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.