STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86709.1Hypothetical protein; Identified by glimmer; putative. (328 aa)    
Predicted Functional Partners:
AEF86387.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00483; match to protein family HMM TIGR01656; match to protein family HMM TIGR01662.
  
  
 0.801
AEF84916.1
Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534.
  
  
 0.790
AEF85968.1
Glycosyltransferase, family 1; Identified by match to protein family HMM PF00534.
  
  
 0.790
AEF84626.1
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase family; Identified by match to protein family HMM PF04464.
       0.708
rfbB
dTDP-glucose 4,6-dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.690
AEF86394.1
Glycosyltransferase, group 2 family; Identified by match to protein family HMM PF00535.
  
  
 0.684
AEF84176.1
Phosphoheptose isomerase; Identified by match to protein family HMM PF01380.
     
 0.673
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.668
AEF84934.1
D-glycero-D-manno-heptose 7-phosphate kinase; Identified by match to protein family HMM PF00288; match to protein family HMM PF08544.
       0.667
AEF83914.1
Glycosyltransferase, family 2; Identified by match to protein family HMM PF00535.
  
  
 0.664
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.