STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86094.1Conserved hypothetical protein; Identified by match to protein family HMM PF08495. (386 aa)    
Predicted Functional Partners:
AEF87011.1
Endoglucanase M (EGM) (Endo-1,4-beta-glucanase)(Cellulase M); Identified by match to protein family HMM PF02127; match to protein family HMM PF05343.
       0.495
AEF84961.1
Peptidase M42; Identified by match to protein family HMM PF01546; match to protein family HMM PF05343.
       0.495
AEF85543.1
Oligopeptide transport ATP-binding protein AppF; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.495
AEF86555.1
Dipeptide transport ATP-binding protein DppD; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
       0.495
AEF84597.1
Glutathione transport system permease protein GsiD; Identified by match to protein family HMM PF00528.
       0.495
AEF86901.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
       0.485
AEF85912.1
PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.
  
  
 0.457
AEF84382.1
Putative response regulator; Identified by match to protein family HMM PF00072.
  
    0.452
AEF86533.1
Two component transcriptional regulator, winged helix family; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
  
    0.404
AEF84793.1
PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229.
  
    0.404
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.