Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83857.1 | AEF86880.1 | TREPR_0502 | TREPR_2399 | Identified by match to protein family HMM PF01424. | Inner membrane protein; Identified by match to protein family HMM PF02096. | 0.618 |
| AEF83857.1 | AEF86899.1 | TREPR_0502 | TREPR_2402 | Identified by match to protein family HMM PF01424. | Inner membrane protein; Identified by match to protein family HMM PF02096. | 0.618 |
| AEF83857.1 | AEF86948.1 | TREPR_0502 | TREPR_2476 | Identified by match to protein family HMM PF01424. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.565 |
| AEF83857.1 | trpA | TREPR_0502 | TREPR_0388 | Identified by match to protein family HMM PF01424. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.601 |
| AEF85293.1 | AEF86948.1 | TREPR_1960 | TREPR_2476 | Hypothetical protein; Identified by glimmer; putative. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.569 |
| AEF86766.1 | AEF86948.1 | TREPR_0019 | TREPR_2476 | Prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.581 |
| AEF86880.1 | AEF83857.1 | TREPR_2399 | TREPR_0502 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Identified by match to protein family HMM PF01424. | 0.618 |
| AEF86880.1 | AEF86899.1 | TREPR_2399 | TREPR_2402 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Inner membrane protein; Identified by match to protein family HMM PF02096. | 0.566 |
| AEF86880.1 | AEF86948.1 | TREPR_2399 | TREPR_2476 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.504 |
| AEF86880.1 | trpA | TREPR_2399 | TREPR_0388 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.448 |
| AEF86899.1 | AEF83857.1 | TREPR_2402 | TREPR_0502 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Identified by match to protein family HMM PF01424. | 0.618 |
| AEF86899.1 | AEF86880.1 | TREPR_2402 | TREPR_2399 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Inner membrane protein; Identified by match to protein family HMM PF02096. | 0.566 |
| AEF86899.1 | AEF86948.1 | TREPR_2402 | TREPR_2476 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | 0.523 |
| AEF86899.1 | trpA | TREPR_2402 | TREPR_0388 | Inner membrane protein; Identified by match to protein family HMM PF02096. | Tryptophan synthase, alpha subunit; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.448 |
| AEF86948.1 | AEF83857.1 | TREPR_2476 | TREPR_0502 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Identified by match to protein family HMM PF01424. | 0.565 |
| AEF86948.1 | AEF85293.1 | TREPR_2476 | TREPR_1960 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Hypothetical protein; Identified by glimmer; putative. | 0.569 |
| AEF86948.1 | AEF86766.1 | TREPR_2476 | TREPR_0019 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Prenyltransferase, UbiA family; Identified by match to protein family HMM PF01040; Belongs to the UbiA prenyltransferase family. | 0.581 |
| AEF86948.1 | AEF86880.1 | TREPR_2476 | TREPR_2399 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Inner membrane protein; Identified by match to protein family HMM PF02096. | 0.504 |
| AEF86948.1 | AEF86899.1 | TREPR_2476 | TREPR_2402 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Inner membrane protein; Identified by match to protein family HMM PF02096. | 0.523 |
| AEF86948.1 | alr | TREPR_2476 | TREPR_1685 | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.583 |
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