Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84477.1 | AEF84822.1 | TREPR_3653 | TREPR_0655 | Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | 0.928 |
| AEF84477.1 | AEF85286.1 | TREPR_3653 | TREPR_0134 | Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. | 0.929 |
| AEF84477.1 | xylA | TREPR_3653 | TREPR_2497 | Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family. | 0.949 |
| AEF84477.1 | xylB | TREPR_3653 | TREPR_2498 | Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | Xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312. | 0.929 |
| AEF84644.1 | AEF85087.1 | TREPR_1339 | TREPR_2660 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Aldose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer. | 0.920 |
| AEF84644.1 | AEF86116.1 | TREPR_1339 | TREPR_0489 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | PTS system, IIA component; Identified by match to protein family HMM PF00359. | 0.900 |
| AEF84644.1 | AEF86314.1 | TREPR_1339 | TREPR_3599 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Fructokinase; Identified by match to protein family HMM PF00294. | 0.905 |
| AEF84644.1 | xylA | TREPR_1339 | TREPR_2497 | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family. | 0.904 |
| AEF84822.1 | AEF84477.1 | TREPR_0655 | TREPR_3653 | Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | 0.928 |
| AEF84822.1 | AEF85286.1 | TREPR_0655 | TREPR_0134 | Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. | 0.925 |
| AEF84822.1 | xylA | TREPR_0655 | TREPR_2497 | Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family. | 0.945 |
| AEF84822.1 | xylB | TREPR_0655 | TREPR_2498 | Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | Xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312. | 0.926 |
| AEF85087.1 | AEF84644.1 | TREPR_2660 | TREPR_1339 | Aldose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer. | Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727. | 0.920 |
| AEF85087.1 | xylA | TREPR_2660 | TREPR_2497 | Aldose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer. | Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family. | 0.548 |
| AEF85122.1 | xylA | TREPR_2499 | TREPR_2497 | Protein of unknown function DUF52; Identified by match to protein family HMM PF01875. | Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family. | 0.621 |
| AEF85122.1 | xylB | TREPR_2499 | TREPR_2498 | Protein of unknown function DUF52; Identified by match to protein family HMM PF01875. | Xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312. | 0.762 |
| AEF85286.1 | AEF84477.1 | TREPR_0134 | TREPR_3653 | D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. | Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | 0.929 |
| AEF85286.1 | AEF84822.1 | TREPR_0134 | TREPR_0655 | D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. | Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782. | 0.925 |
| AEF85286.1 | xylA | TREPR_0134 | TREPR_2497 | D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. | Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family. | 0.912 |
| AEF85286.1 | xylB | TREPR_0134 | TREPR_2498 | D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240. | Xylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312. | 0.924 |
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