STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312. (496 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family.
 
 
 0.991
AEF84477.1
Carhohydrate kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.
  
  
 
0.929
AEF84822.1
Sugar kinase, fggy family; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782.
  
  
 
0.926
AEF85286.1
D-xylulose reductase (Xylitol dehydrogenase) (XDH); Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
 
 
 0.924
rpe
Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.923
AEF85122.1
Protein of unknown function DUF52; Identified by match to protein family HMM PF01875.
  
    0.762
AEF85055.1
Hypothetical protein; Identified by glimmer; putative.
       0.548
AEF84466.1
Class II aldolase and adducin N-terminal domain protein; Identified by match to protein family HMM PF00596.
  
  
 0.473
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.449
AEF85236.1
Permease, GntP family; Identified by match to protein family HMM PF02447; match to protein family HMM PF03600.
  
  
 0.414
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.