Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83851.1 | AEF83884.1 | TREPR_2504 | TREPR_2503 | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | ABC transporter permease protein. | 0.994 |
| AEF83851.1 | AEF85431.1 | TREPR_2504 | TREPR_2506 | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | YheO domain protein; Identified by match to protein family HMM PF08348. | 0.478 |
| AEF83851.1 | AEF85899.1 | TREPR_2504 | TREPR_2501 | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF83851.1 | AEF86625.1 | TREPR_2504 | TREPR_2502 | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | Hypothetical protein; Identified by glimmer; putative. | 0.960 |
| AEF83851.1 | rnz | TREPR_2504 | TREPR_2505 | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.789 |
| AEF83884.1 | AEF83851.1 | TREPR_2503 | TREPR_2504 | ABC transporter permease protein. | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | 0.994 |
| AEF83884.1 | AEF85431.1 | TREPR_2503 | TREPR_2506 | ABC transporter permease protein. | YheO domain protein; Identified by match to protein family HMM PF08348. | 0.478 |
| AEF83884.1 | AEF85899.1 | TREPR_2503 | TREPR_2501 | ABC transporter permease protein. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF83884.1 | AEF86625.1 | TREPR_2503 | TREPR_2502 | ABC transporter permease protein. | Hypothetical protein; Identified by glimmer; putative. | 0.987 |
| AEF83884.1 | rnz | TREPR_2503 | TREPR_2505 | ABC transporter permease protein. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.756 |
| AEF84547.1 | AEF86625.1 | TREPR_1032 | TREPR_2502 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.477 |
| AEF85431.1 | AEF83851.1 | TREPR_2506 | TREPR_2504 | YheO domain protein; Identified by match to protein family HMM PF08348. | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | 0.478 |
| AEF85431.1 | AEF83884.1 | TREPR_2506 | TREPR_2503 | YheO domain protein; Identified by match to protein family HMM PF08348. | ABC transporter permease protein. | 0.478 |
| AEF85431.1 | AEF85899.1 | TREPR_2506 | TREPR_2501 | YheO domain protein; Identified by match to protein family HMM PF08348. | Hypothetical protein; Identified by glimmer; putative. | 0.478 |
| AEF85431.1 | AEF86625.1 | TREPR_2506 | TREPR_2502 | YheO domain protein; Identified by match to protein family HMM PF08348. | Hypothetical protein; Identified by glimmer; putative. | 0.478 |
| AEF85431.1 | rnz | TREPR_2506 | TREPR_2505 | YheO domain protein; Identified by match to protein family HMM PF08348. | Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family. | 0.510 |
| AEF85899.1 | AEF83851.1 | TREPR_2501 | TREPR_2504 | Hypothetical protein; Identified by glimmer; putative. | ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005. | 0.773 |
| AEF85899.1 | AEF83884.1 | TREPR_2501 | TREPR_2503 | Hypothetical protein; Identified by glimmer; putative. | ABC transporter permease protein. | 0.773 |
| AEF85899.1 | AEF85431.1 | TREPR_2501 | TREPR_2506 | Hypothetical protein; Identified by glimmer; putative. | YheO domain protein; Identified by match to protein family HMM PF08348. | 0.478 |
| AEF85899.1 | AEF86625.1 | TREPR_2501 | TREPR_2502 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
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