STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83884.1ABC transporter permease protein. (244 aa)    
Predicted Functional Partners:
AEF83851.1
ABC-type multidrug transport system, ATPase component; Identified by match to protein family HMM PF00005.
 
 
 0.994
AEF86625.1
Hypothetical protein; Identified by glimmer; putative.
  
 0.987
AEF83702.1
Daunorubicin resistance ATP-binding protein DrrA; Identified by match to protein family HMM PF00005.
  
 
 0.882
AEF85899.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.756
AEF86805.1
Serine/threonine-protein kinase Pkn1; Identified by match to protein family HMM PF03781.
 
  
 0.518
AEF85431.1
YheO domain protein; Identified by match to protein family HMM PF08348.
       0.478
AEF84429.1
Serine/threonine kinase; Identified by match to protein family HMM PF03781.
  
   
 0.474
AEF85715.1
XylR; Identified by match to protein family HMM PF03781.
  
   
 0.449
AEF86049.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03781.
  
   
 0.442
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.