STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84645.12-oxoglutarate decarboxylase; Identified by match to protein family HMM PF02776. (972 aa)    
Predicted Functional Partners:
AEF84306.1
Glycosyltransferase; Identified by match to protein family HMM PF00535.
       0.773
AEF85579.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF86825.1
O-antigen export system permease protein RfbA; Identified by match to protein family HMM PF01061.
       0.773
AEF86126.1
Teichoic acids export ATP-binding protein TagH (Teichoicacid-transporting ATPase); Identified by match to protein family HMM PF00005.
       0.773
AEF84972.1
Conserved hypothetical protein.
       0.773
glf
UDP-galactopyranose mutase; Identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031.
       0.768
AEF86711.1
Glycosyltransferase, family 2; Identified by match to protein family HMM PF00535.
       0.768
AEF83889.1
Citrate lyase ligase C- domain protein; Identified by match to protein family HMM PF01467; match to protein family HMM PF08218; match to protein family HMM TIGR00125.
       0.678
AEF84754.1
Citrate lyase ligase C- domain protein; Identified by match to protein family HMM PF01467; match to protein family HMM PF08218; match to protein family HMM TIGR00125.
       0.647
AEF83795.1
Citrate lyase ligase C- domain protein; Identified by match to protein family HMM PF01467; match to protein family HMM PF08218; match to protein family HMM TIGR00125.
       0.617
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.