STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85054.1Putative sulfonate/nitrate transport system substrate-binding protein. (340 aa)    
Predicted Functional Partners:
AEF86052.1
Putative ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.969
AEF85281.1
Aliphatic sulfonates import ATP-binding protein SsuB 1; Identified by match to protein family HMM PF00005.
 
  
 0.907
fliJ
Flagellar export protein FliJ; Identified by match to protein family HMM TIGR02473.
       0.664
fliI
Flagellar protein export ATPase FliI; Identified by match to protein family HMM PF00006; match to protein family HMM PF02874; match to protein family HMM TIGR01026; match to protein family HMM TIGR03496.
       0.664
fliF
Flagellar M-ring protein FliF; Identified by match to protein family HMM PF01514; match to protein family HMM PF08345; match to protein family HMM TIGR00206.
  
    0.664
AEF85515.1
Flagellar assembly protein; Identified by match to protein family HMM PF02108.
       0.660
fliG
Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
       0.660
AEF85461.1
Taurine ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.508
AEF83647.1
Taurine transport system permease protein TauC; Identified by match to protein family HMM PF00528.
 
  
 0.496
AEF86183.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.495
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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