STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84283.1Hypothetical protein; Identified by glimmer; putative. (654 aa)    
Predicted Functional Partners:
AEF86893.1
Putative lipoprotein.
   
 
 0.875
AEF84392.1
Identified by match to protein family HMM PF01734.
  
 
 0.839
yaeT
Outer membrane protein assembly complex, YaeT protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM PF08479; match to protein family HMM TIGR03303.
  
 
 0.823
AEF85091.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.823
rseP
RIP metalloprotease RseP; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054.
   
  
 0.580
AEF86604.1
Probable ATP-dependent helicase YoaA.
       0.540
AEF85030.1
Putative lipoprotein.
   
 
 0.469
AEF84964.1
Foldase protein PrsA; Identified by match to protein family HMM PF00639.
   
 
 0.469
hisS
histidine--tRNA ligase; Identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442.
  
    0.463
AEF83746.1
Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639.
   
 
 0.438
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.