STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yaeTOuter membrane protein assembly complex, YaeT protein; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244; match to protein family HMM PF08479; match to protein family HMM TIGR03303. (836 aa)    
Predicted Functional Partners:
AEF84659.1
Cationic outer membrane protein; Identified by match to protein family HMM PF03938.
 
  
 0.943
rseP
RIP metalloprotease RseP; Identified by match to protein family HMM PF00595; match to protein family HMM PF02163; match to protein family HMM TIGR00054.
 
  
 0.846
AEF86125.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04357.
     
 0.839
AEF86893.1
Putative lipoprotein.
 
 
 0.831
AEF84283.1
Hypothetical protein; Identified by glimmer; putative.
  
 
 0.823
AEF87033.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
  
 0.787
cmk
Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717.
 
   0.776
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
 
   
 0.773
AEF85414.1
Putative lipoprotein releasing system, permease protein; Identified by match to protein family HMM PF02687.
 
   
 0.761
AEF86073.1
Putative permease, YjgP/YjgQ family; Identified by match to protein family HMM PF03739; overlaps another CDS with the same product name.
 
     0.740
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.