Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83935.1 | AEF83966.1 | TREPR_1148 | TREPR_2652 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | 0.971 |
| AEF83935.1 | AEF84135.1 | TREPR_1148 | TREPR_1150 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | Putative V-type ATPase, subunit F. | 0.999 |
| AEF83935.1 | AEF85933.1 | TREPR_1148 | TREPR_1147 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | Hypothetical protein; Identified by glimmer; putative. | 0.996 |
| AEF83935.1 | AEF86390.1 | TREPR_1148 | TREPR_2654 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | V-type ATPase, D subunit; Identified by match to protein family HMM PF01813; match to protein family HMM TIGR00309. | 0.939 |
| AEF83935.1 | AEF86698.1 | TREPR_1148 | TREPR_2658 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | V-type ATP synthase subunit E (V-type ATPase subunit E). | 0.991 |
| AEF83935.1 | AEF86936.1 | TREPR_1148 | TREPR_2653 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | V-type ATP synthase subunit I 1 (V-type ATPase subunit I1); Identified by match to protein family HMM PF01496. | 0.926 |
| AEF83935.1 | atpA-2 | TREPR_1148 | TREPR_1152 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | V-type sodium ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.999 |
| AEF83935.1 | atpA-3 | TREPR_1148 | TREPR_2656 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | V-type sodium ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.990 |
| AEF83935.1 | atpB-2 | TREPR_1148 | TREPR_1153 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | V-type sodium ATP synthase, B subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.999 |
| AEF83935.1 | atpB-3 | TREPR_1148 | TREPR_2655 | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | V-type sodium ATP synthase, B subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.986 |
| AEF83966.1 | AEF83935.1 | TREPR_2652 | TREPR_1148 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type ATP synthase subunit I 2 (V-type ATPase subunit I2); Identified by match to protein family HMM PF01496; Belongs to the V-ATPase 116 kDa subunit family. | 0.971 |
| AEF83966.1 | AEF84135.1 | TREPR_2652 | TREPR_1150 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | Putative V-type ATPase, subunit F. | 0.953 |
| AEF83966.1 | AEF85933.1 | TREPR_2652 | TREPR_1147 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | Hypothetical protein; Identified by glimmer; putative. | 0.984 |
| AEF83966.1 | AEF86390.1 | TREPR_2652 | TREPR_2654 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type ATPase, D subunit; Identified by match to protein family HMM PF01813; match to protein family HMM TIGR00309. | 0.999 |
| AEF83966.1 | AEF86698.1 | TREPR_2652 | TREPR_2658 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type ATP synthase subunit E (V-type ATPase subunit E). | 0.999 |
| AEF83966.1 | AEF86936.1 | TREPR_2652 | TREPR_2653 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type ATP synthase subunit I 1 (V-type ATPase subunit I1); Identified by match to protein family HMM PF01496. | 0.999 |
| AEF83966.1 | atpA-2 | TREPR_2652 | TREPR_1152 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type sodium ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.960 |
| AEF83966.1 | atpA-3 | TREPR_2652 | TREPR_2656 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type sodium ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. | 0.998 |
| AEF83966.1 | atpB-2 | TREPR_2652 | TREPR_1153 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type sodium ATP synthase, B subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.956 |
| AEF83966.1 | atpB-3 | TREPR_2652 | TREPR_2655 | ATP synthase subunit K; Identified by match to protein family HMM PF00137. | V-type sodium ATP synthase, B subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. | 0.999 |
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