STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85087.1Aldose 1-epimerase (Mutarotase); Converts alpha-aldose to the beta-anomer. (350 aa)    
Predicted Functional Partners:
AEF85223.1
Putative galactokinase (Galactose kinase); Identified by match to protein family HMM PF00288; match to protein family HMM PF08544; Belongs to the GHMP kinase family.
 0.990
AEF84945.1
Galactokinase; Identified by match to protein family HMM PF00288; Belongs to the GHMP kinase family.
 
 0.979
AEF84644.1
Hexokinase; Identified by match to protein family HMM PF00349; match to protein family HMM PF03727.
  
  
 0.920
AEF85385.1
Alpha galactosidase; Identified by match to protein family HMM PF02065.
  
 
  0.914
galE
UDP-glucose 4-epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF05368; match to protein family HMM PF07993; match to protein family HMM TIGR01179; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
  
 0.876
AEF84155.1
Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00127; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
  
 0.561
xylA
Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family.
 
  
 0.548
AEF86532.1
PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830.
  
  
 0.547
atpA-3
V-type sodium ATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.
       0.500
AEF83828.1
Conserved hypothetical protein.
       0.500
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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