STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84155.1Isocitrate dehydrogenase, NADP-dependent; Identified by match to protein family HMM PF00180; match to protein family HMM TIGR00127; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (399 aa)    
Predicted Functional Partners:
AEF83675.1
Identified by match to protein family HMM PF00330.
  
 0.984
AEF84129.1
Identified by match to protein family HMM PF00330; match to protein family HMM PF00694.
  
 0.984
AEF85677.1
Citrate synthase domain protein; Identified by match to protein family HMM PF00285.
  
 
 0.951
vorB
2-oxoglutarate oxidoreductase, alpha subunit; Identified by match to protein family HMM PF01855; match to protein family HMM PF02780.
   
 
 0.917
AEF85594.1
2-oxoglutarate oxidoreductase, beta subunit; Identified by match to protein family HMM PF02775.
     
 0.916
gltB
Glutamate synthase, large subunit; Identified by match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898.
    
 0.915
AEF84370.1
2-oxoglutarate ferredoxin oxidoreductase subunit gamma; Identified by match to protein family HMM PF01558.
     
 0.911
AEF84656.1
Conserved domain protein; Identified by match to protein family HMM PF00037.
     
  0.900
argH
Argininosuccinate lyase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838.
     
 0.835
aspA
Aspartate ammonia-lyase; Identified by match to protein family HMM PF00206.
     
 0.835
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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