Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83686.1 | AEF84434.1 | TREPR_0941 | TREPR_2700 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein. | 0.784 |
| AEF83686.1 | AEF85375.1 | TREPR_0941 | TREPR_3073 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Hypothetical protein; Identified by glimmer; putative. | 0.760 |
| AEF83743.1 | AEF84263.1 | TREPR_2704 | TREPR_2701 | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | ATPase, AAA family; Identified by match to protein family HMM PF07728. | 0.571 |
| AEF83743.1 | AEF84434.1 | TREPR_2704 | TREPR_2700 | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Conserved hypothetical protein. | 0.460 |
| AEF83743.1 | AEF84680.1 | TREPR_2704 | TREPR_2703 | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Conserved hypothetical protein. | 0.773 |
| AEF83743.1 | AEF85670.1 | TREPR_2704 | TREPR_2702 | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Hypothetical protein; Identified by glimmer; putative. | 0.570 |
| AEF83743.1 | AEF86574.1 | TREPR_2704 | TREPR_2705 | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | Two component sensor kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.965 |
| AEF84263.1 | AEF83743.1 | TREPR_2701 | TREPR_2704 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.571 |
| AEF84263.1 | AEF84434.1 | TREPR_2701 | TREPR_2700 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein. | 0.912 |
| AEF84263.1 | AEF84680.1 | TREPR_2701 | TREPR_2703 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein. | 0.570 |
| AEF84263.1 | AEF85435.1 | TREPR_2701 | TREPR_2699 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Conserved hypothetical protein. | 0.420 |
| AEF84263.1 | AEF85670.1 | TREPR_2701 | TREPR_2702 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| AEF84263.1 | AEF86406.1 | TREPR_2701 | TREPR_2698 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Putative membrane protein; Identified by match to protein family HMM PF03773. | 0.419 |
| AEF84263.1 | AEF86574.1 | TREPR_2701 | TREPR_2705 | ATPase, AAA family; Identified by match to protein family HMM PF07728. | Two component sensor kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518. | 0.570 |
| AEF84434.1 | AEF83686.1 | TREPR_2700 | TREPR_0941 | Conserved hypothetical protein. | ATPase, AAA family; Identified by match to protein family HMM PF07728. | 0.784 |
| AEF84434.1 | AEF83743.1 | TREPR_2700 | TREPR_2704 | Conserved hypothetical protein. | Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.460 |
| AEF84434.1 | AEF84263.1 | TREPR_2700 | TREPR_2701 | Conserved hypothetical protein. | ATPase, AAA family; Identified by match to protein family HMM PF07728. | 0.912 |
| AEF84434.1 | AEF84680.1 | TREPR_2700 | TREPR_2703 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.460 |
| AEF84434.1 | AEF85375.1 | TREPR_2700 | TREPR_3073 | Conserved hypothetical protein. | Hypothetical protein; Identified by glimmer; putative. | 0.677 |
| AEF84434.1 | AEF85435.1 | TREPR_2700 | TREPR_2699 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.515 |
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