STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85134.1Na+-driven multidrug efflux pump; Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797. (451 aa)    
Predicted Functional Partners:
AEF84587.1
Transcriptional regulator, MarR family; Identified by match to protein family HMM PF01047.
  
  
 0.783
AEF86574.1
Two component sensor kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518.
  
    0.552
AEF84680.1
Conserved hypothetical protein.
       0.539
AEF83743.1
Transcriptional regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486.
       0.539
AEF84263.1
ATPase, AAA family; Identified by match to protein family HMM PF07728.
       0.410
AEF85670.1
Hypothetical protein; Identified by glimmer; putative.
       0.410
cmk
Cytidylate kinase/ribosomal protein S1; Identified by match to protein family HMM PF00575; match to protein family HMM PF02224; match to protein family HMM TIGR00017; match to protein family HMM TIGR00717.
  
    0.401
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.