Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84055.1 | AEF85566.1 | TREPR_2751 | TREPR_2746 | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.519 |
| AEF84055.1 | AEF86193.1 | TREPR_2751 | TREPR_2745 | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | 0.533 |
| AEF84055.1 | AEF86263.1 | TREPR_2751 | TREPR_2747 | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | CoA enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. | 0.520 |
| AEF84055.1 | lysS | TREPR_2751 | TREPR_2750 | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | lysine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.757 |
| AEF84055.1 | ndk | TREPR_2751 | TREPR_2749 | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | Nucleoside diphosphate kinase family; Identified by match to protein family HMM PF00334. | 0.768 |
| AEF84598.1 | AEF86193.1 | TREPR_2723 | TREPR_2745 | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | 0.405 |
| AEF85566.1 | AEF84055.1 | TREPR_2746 | TREPR_2751 | Conserved hypothetical protein. | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | 0.519 |
| AEF85566.1 | AEF86193.1 | TREPR_2746 | TREPR_2745 | Conserved hypothetical protein. | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | 0.898 |
| AEF85566.1 | AEF86263.1 | TREPR_2746 | TREPR_2747 | Conserved hypothetical protein. | CoA enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. | 0.911 |
| AEF85566.1 | lysS | TREPR_2746 | TREPR_2750 | Conserved hypothetical protein. | lysine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.529 |
| AEF85566.1 | ndk | TREPR_2746 | TREPR_2749 | Conserved hypothetical protein. | Nucleoside diphosphate kinase family; Identified by match to protein family HMM PF00334. | 0.529 |
| AEF85829.1 | AEF86193.1 | TREPR_3304 | TREPR_2745 | Permease; Identified by match to protein family HMM PF06541. | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | 0.630 |
| AEF85829.1 | AEF86263.1 | TREPR_3304 | TREPR_2747 | Permease; Identified by match to protein family HMM PF06541. | CoA enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. | 0.659 |
| AEF86193.1 | AEF84055.1 | TREPR_2745 | TREPR_2751 | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | 0.533 |
| AEF86193.1 | AEF84598.1 | TREPR_2745 | TREPR_2723 | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | IscU protein; Identified by match to protein family HMM PF01592; match to protein family HMM PF04324. | 0.405 |
| AEF86193.1 | AEF85566.1 | TREPR_2745 | TREPR_2746 | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | Conserved hypothetical protein. | 0.898 |
| AEF86193.1 | AEF85829.1 | TREPR_2745 | TREPR_3304 | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | Permease; Identified by match to protein family HMM PF06541. | 0.630 |
| AEF86193.1 | AEF86263.1 | TREPR_2745 | TREPR_2747 | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | CoA enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. | 0.832 |
| AEF86193.1 | lysS | TREPR_2745 | TREPR_2750 | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | lysine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.529 |
| AEF86193.1 | ndk | TREPR_2745 | TREPR_2749 | HD family hydrolase, diverged; Identified by match to protein family HMM PF01966. | Nucleoside diphosphate kinase family; Identified by match to protein family HMM PF00334. | 0.540 |
page 1 of 2