STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86263.1CoA enzyme activase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241. (1474 aa)    
Predicted Functional Partners:
AEF85566.1
Conserved hypothetical protein.
 
     0.911
AEF86193.1
HD family hydrolase, diverged; Identified by match to protein family HMM PF01966.
 
     0.832
AEF85261.1
2-hydroxyglutaryl-CoA dehydratase, D-component; Identified by match to protein family HMM PF06050.
 
 
 0.799
AEF83635.1
Aldehyde-alcohol dehydrogenase 2; Identified by match to protein family HMM PF00171; match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
  
 0.725
AEF84709.1
Activator of 2-hydroxyglutaryl-CoA dehydratase; Identified by match to protein family HMM PF01869; match to protein family HMM TIGR00241.
 
   
0.696
AEF85829.1
Permease; Identified by match to protein family HMM PF06541.
 
     0.659
ndk
Nucleoside diphosphate kinase family; Identified by match to protein family HMM PF00334.
       0.529
lysS
lysine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.529
pyk
Pyruvate kinase; Identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; Belongs to the pyruvate kinase family.
  
  
 0.520
AEF84055.1
Methyl parathion hydrolase; Identified by match to protein family HMM PF00753.
       0.520
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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