Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83746.1 | AEF84987.1 | TREPR_3390 | TREPR_3552 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.773 |
| AEF83746.1 | AEF85558.1 | TREPR_3390 | TREPR_1003 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Putative recombination protein O. | 0.800 |
| AEF83746.1 | AEF85661.1 | TREPR_3390 | TREPR_2807 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Phosphoribosyl transferase domain protein. | 0.787 |
| AEF83746.1 | AEF85958.1 | TREPR_3390 | TREPR_1191 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Conserved hypothetical protein. | 0.749 |
| AEF83746.1 | AEF86028.1 | TREPR_3390 | TREPR_0667 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Conserved hypothetical protein. | 0.774 |
| AEF83746.1 | AEF86672.1 | TREPR_3390 | TREPR_1622 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Putative uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.688 |
| AEF83746.1 | cmk-2 | TREPR_3390 | TREPR_2412 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | Putative cytidylate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR02173. | 0.750 |
| AEF83746.1 | lysS | TREPR_3390 | TREPR_2750 | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | lysine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.632 |
| AEF84055.1 | lysS | TREPR_2751 | TREPR_2750 | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | lysine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.757 |
| AEF84055.1 | ndk | TREPR_2751 | TREPR_2749 | Methyl parathion hydrolase; Identified by match to protein family HMM PF00753. | Nucleoside diphosphate kinase family; Identified by match to protein family HMM PF00334. | 0.768 |
| AEF84987.1 | AEF83746.1 | TREPR_3552 | TREPR_3390 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | 0.773 |
| AEF84987.1 | AEF85558.1 | TREPR_3552 | TREPR_1003 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Putative recombination protein O. | 0.771 |
| AEF84987.1 | AEF85661.1 | TREPR_3552 | TREPR_2807 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Phosphoribosyl transferase domain protein. | 0.766 |
| AEF84987.1 | AEF85958.1 | TREPR_3552 | TREPR_1191 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Conserved hypothetical protein. | 0.761 |
| AEF84987.1 | AEF86028.1 | TREPR_3552 | TREPR_0667 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Conserved hypothetical protein. | 0.772 |
| AEF84987.1 | AEF86672.1 | TREPR_3552 | TREPR_1622 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Putative uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.596 |
| AEF84987.1 | cmk-2 | TREPR_3552 | TREPR_2412 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | Putative cytidylate kinase; Identified by match to protein family HMM PF01202; match to protein family HMM TIGR02173. | 0.746 |
| AEF84987.1 | lysS | TREPR_3552 | TREPR_2750 | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | lysine--tRNA ligase; Identified by match to protein family HMM PF01406; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.681 |
| AEF85558.1 | AEF83746.1 | TREPR_1003 | TREPR_3390 | Putative recombination protein O. | Ppic-type ppiase domain protein; Identified by match to protein family HMM PF00639. | 0.800 |
| AEF85558.1 | AEF84987.1 | TREPR_1003 | TREPR_3552 | Putative recombination protein O. | Acetyltransferase, GNAT family; Identified by match to protein family HMM PF00583. | 0.771 |
page 1 of 5