Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84538.1 | AEF85119.1 | TREPR_2762 | TREPR_2761 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Hypothetical protein; Identified by glimmer; putative. | 0.586 |
| AEF84538.1 | AEF85231.1 | TREPR_2762 | TREPR_1879 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.489 |
| AEF84538.1 | AEF85912.1 | TREPR_2762 | TREPR_0969 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | 0.502 |
| AEF84538.1 | AEF86526.1 | TREPR_2762 | TREPR_2760 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Hypothetical protein; Identified by glimmer; putative. | 0.403 |
| AEF84538.1 | AEF86977.1 | TREPR_2762 | TREPR_2455 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01627. | 0.489 |
| AEF84538.1 | AEF87032.1 | TREPR_2762 | TREPR_0183 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.549 |
| AEF85119.1 | AEF84538.1 | TREPR_2761 | TREPR_2762 | Hypothetical protein; Identified by glimmer; putative. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.586 |
| AEF85119.1 | AEF85231.1 | TREPR_2761 | TREPR_1879 | Hypothetical protein; Identified by glimmer; putative. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.955 |
| AEF85119.1 | AEF85912.1 | TREPR_2761 | TREPR_0969 | Hypothetical protein; Identified by glimmer; putative. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | 0.958 |
| AEF85119.1 | AEF86526.1 | TREPR_2761 | TREPR_2760 | Hypothetical protein; Identified by glimmer; putative. | Hypothetical protein; Identified by glimmer; putative. | 0.603 |
| AEF85119.1 | AEF86977.1 | TREPR_2761 | TREPR_2455 | Hypothetical protein; Identified by glimmer; putative. | Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01627. | 0.942 |
| AEF85119.1 | AEF87032.1 | TREPR_2761 | TREPR_0183 | Hypothetical protein; Identified by glimmer; putative. | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.903 |
| AEF85231.1 | AEF84538.1 | TREPR_1879 | TREPR_2762 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.489 |
| AEF85231.1 | AEF85119.1 | TREPR_1879 | TREPR_2761 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Hypothetical protein; Identified by glimmer; putative. | 0.955 |
| AEF85231.1 | AEF85912.1 | TREPR_1879 | TREPR_0969 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | 0.981 |
| AEF85231.1 | AEF86526.1 | TREPR_1879 | TREPR_2760 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Hypothetical protein; Identified by glimmer; putative. | 0.427 |
| AEF85231.1 | AEF86977.1 | TREPR_1879 | TREPR_2455 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Peptidase M52, hydrogen uptake protein; Identified by match to protein family HMM PF01627. | 0.981 |
| AEF85231.1 | AEF87032.1 | TREPR_1879 | TREPR_0183 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | Multi-sensor hybrid histidine kinase; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.992 |
| AEF85912.1 | AEF84538.1 | TREPR_0969 | TREPR_2762 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.502 |
| AEF85912.1 | AEF85119.1 | TREPR_0969 | TREPR_2761 | PAS domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08448; match to protein family HMM TIGR00229. | Hypothetical protein; Identified by glimmer; putative. | 0.958 |
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