Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84279.1 | AEF84790.1 | TREPR_3587 | TREPR_2786 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM PF09479; match to protein family HMM TIGR01376. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | 0.465 |
| AEF84389.1 | AEF84723.1 | TREPR_1884 | TREPR_3861 | Conserved hypothetical protein. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.410 |
| AEF84389.1 | AEF84790.1 | TREPR_1884 | TREPR_2786 | Conserved hypothetical protein. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | 0.545 |
| AEF84389.1 | AEF86376.1 | TREPR_1884 | TREPR_3171 | Conserved hypothetical protein. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415. | 0.407 |
| AEF84723.1 | AEF84389.1 | TREPR_3861 | TREPR_1884 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Conserved hypothetical protein. | 0.410 |
| AEF84723.1 | AEF84769.1 | TREPR_3861 | TREPR_2855 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.571 |
| AEF84723.1 | AEF84790.1 | TREPR_3861 | TREPR_2786 | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | 0.464 |
| AEF84769.1 | AEF84723.1 | TREPR_2855 | TREPR_3861 | Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.571 |
| AEF84769.1 | AEF84790.1 | TREPR_2855 | TREPR_2786 | Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | 0.801 |
| AEF84780.1 | AEF84790.1 | TREPR_1346 | TREPR_2786 | Probable extracellular nuclease. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | 0.457 |
| AEF84790.1 | AEF84279.1 | TREPR_2786 | TREPR_3587 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM PF09479; match to protein family HMM TIGR01376. | 0.465 |
| AEF84790.1 | AEF84389.1 | TREPR_2786 | TREPR_1884 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Conserved hypothetical protein. | 0.545 |
| AEF84790.1 | AEF84723.1 | TREPR_2786 | TREPR_3861 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Tetratricopeptide repeat protein; Identified by match to protein family HMM PF00515; match to protein family HMM PF07719. | 0.464 |
| AEF84790.1 | AEF84769.1 | TREPR_2786 | TREPR_2855 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Flagellar motor switch protein FliY; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.801 |
| AEF84790.1 | AEF84780.1 | TREPR_2786 | TREPR_1346 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Probable extracellular nuclease. | 0.457 |
| AEF84790.1 | AEF84955.1 | TREPR_2786 | TREPR_1387 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Putative lipoprotein. | 0.725 |
| AEF84790.1 | AEF84969.1 | TREPR_2786 | TREPR_2787 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Fibronectin type III domain protein; Identified by match to protein family HMM PF00041. | 0.752 |
| AEF84790.1 | AEF85920.1 | TREPR_2786 | TREPR_3174 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Putative extracellular nuclease. | 0.462 |
| AEF84790.1 | AEF86336.1 | TREPR_2786 | TREPR_2784 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Probable extracellular nuclease; Identified by match to protein family HMM TIGR01376. | 0.659 |
| AEF84790.1 | AEF86376.1 | TREPR_2786 | TREPR_3171 | Putative extracellular nuclease; Identified by match to protein family HMM PF02415; match to protein family HMM TIGR01376. | Putative extracellular nuclease; Identified by match to protein family HMM PF02415. | 0.460 |
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