STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86973.1Putative lipoprotein. (372 aa)    
Predicted Functional Partners:
AEF84461.1
Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547.
  
     0.723
AEF84041.1
Hypothetical protein; Identified by glimmer; putative.
  
     0.709
AEF84084.1
SalB; Identified by match to protein family HMM PF00111.
   
 
 0.704
AEF86398.1
Sulfate permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740.
   
   0.703
AEF86510.1
Identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797.
       0.652
AEF83603.1
Conserved hypothetical ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547.
  
     0.563
AEF85496.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
     0.531
rnfB
Ferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
   
   0.510
AEF85470.1
Conserved hypothetical protein.
  
     0.502
deoD
Purine nucleoside phosphorylase; Identified by match to protein family HMM PF01048; match to protein family HMM TIGR00107.
     
  0.499
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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