STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84682.1Putative membrane protein. (880 aa)    
Predicted Functional Partners:
AEF85691.1
Conserved hypothetical protein.
  
 0.956
AEF84020.1
Conserved hypothetical protein.
 
   
 0.949
AEF86191.1
Conserved hypothetical protein.
  
 0.802
AEF84244.1
Conserved hypothetical protein.
 
   
 0.764
AEF83577.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
       0.519
AEF87030.1
Putative transporter, major facilitator family; Identified by match to protein family HMM PF07690.
  
     0.466
AEF84122.1
Putative universal stress protein family; Identified by match to protein family HMM PF00582.
  
     0.462
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.