STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85691.1Conserved hypothetical protein. (264 aa)    
Predicted Functional Partners:
AEF84682.1
Putative membrane protein.
  
 0.956
AEF84020.1
Conserved hypothetical protein.
 
     0.944
AEF85794.1
Putative membrane protein.
  
 0.844
AEF84244.1
Conserved hypothetical protein.
 
     0.592
AEF83577.1
Transcriptional regulator; Identified by match to protein family HMM PF00440.
     
 0.522
AEF84763.1
N-acetylmuramoyl-L-alanine amidase, family 3; Identified by match to protein family HMM PF01520.
  
 
   0.468
AEF84495.1
Efflux ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
 
 
 
 0.436
rlpA
Lipoprotein, RlpA family; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 0.430
AEF85414.1
Putative lipoprotein releasing system, permease protein; Identified by match to protein family HMM PF02687.
 
 
 
 0.428
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.