STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84368.1PIN domain protein. (98 aa)    
Predicted Functional Partners:
AEF84556.1
PIN domain protein; Identified by match to protein family HMM PF01850.
  
   
 0.752
AEF83882.1
PIN domain protein; Identified by match to protein family HMM PF01850.
  
   
 0.732
AEF86364.1
Putative phage capsid family; Identified by match to protein family HMM PF05065.
  
     0.700
AEF83766.1
Putative phage capsid family; Identified by match to protein family HMM PF05065.
  
     0.693
AEF83892.1
Caudovirus prohead protease; Identified by match to protein family HMM PF04586.
  
     0.676
AEF86331.1
Putative caudovirus prohead protease; Identified by match to protein family HMM PF04586.
  
     0.664
AEF85320.1
Conserved hypothetical protein.
  
     0.603
AEF86423.1
Identified by match to protein family HMM PF01909.
 
     0.590
AEF84389.1
Conserved hypothetical protein.
  
     0.560
AEF84883.1
Conserved hypothetical protein.
  
     0.545
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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