STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF85334.1Conserved hypothetical protein. (257 aa)    
Predicted Functional Partners:
AEF84130.1
Flagellar biosynthesis protein FlhF (Flagella-associated GTP-bindingprotein); Identified by match to protein family HMM PF00448; match to protein family HMM TIGR03499.
   
   0.916
AEF83835.1
Conserved hypothetical protein; Identified by match to protein family HMM PF03961.
     
 0.825
AEF84200.1
Conserved hypothetical protein.
       0.816
AEF86979.1
RNA polymerase sigma-D factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.
  
  
 0.751
AEF85013.1
Flagellar synthesis regulator FleN; Identified by match to protein family HMM PF01656.
  
  
 0.741
AEF86173.1
Hypothetical protein; Identified by glimmer; putative.
       0.732
AEF83636.1
Flagellar filament 34.5 kDa core protein (Class B); Component of the core of the flagella. Belongs to the bacterial flagellin family.
    
 
 0.719
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
       0.617
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
    0.578
fliR
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
     
 0.578
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.