STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83835.1Conserved hypothetical protein; Identified by match to protein family HMM PF03961. (656 aa)    
Predicted Functional Partners:
AEF85013.1
Flagellar synthesis regulator FleN; Identified by match to protein family HMM PF01656.
 
   
 0.858
AEF84130.1
Flagellar biosynthesis protein FlhF (Flagella-associated GTP-bindingprotein); Identified by match to protein family HMM PF00448; match to protein family HMM TIGR03499.
 
   
 0.845
AEF85334.1
Conserved hypothetical protein.
     
 0.825
AEF84200.1
Conserved hypothetical protein.
       0.817
AEF86979.1
RNA polymerase sigma-D factor; Identified by match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02479; match to protein family HMM TIGR02937; Belongs to the sigma-70 factor family.
 
    0.801
AEF85515.1
Flagellar assembly protein; Identified by match to protein family HMM PF02108.
 
     0.782
fliM_2
Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
 
     0.763
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
     0.754
AEF86173.1
Hypothetical protein; Identified by glimmer; putative.
       0.731
AEF84050.1
Chemotaxis protein CheX; Identified by match to protein family HMM PF04509.
  
     0.716
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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