STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF83775.1Transporter, major facilitator family; Identified by match to protein family HMM PF07690. (392 aa)    
Predicted Functional Partners:
AEF87044.1
Conserved hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.696
AEF84033.1
Conserved hypothetical protein.
 
     0.616
AEF83532.1
Cobalamin synthesis protein CobW; Identified by match to protein family HMM PF02492.
       0.539
AEF84729.1
Methionine synthase; Identified by match to protein family HMM PF00809.
       0.539
AEF83706.1
Conserved hypothetical protein.
  
     0.535
AEF84032.1
Methionine synthase; Identified by match to protein family HMM PF02310.
       0.501
AEF85370.1
Vanillate:corrinoid protein methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.484
AEF85769.1
Vanillate:corrinoid protein methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.476
AEF85409.1
Conserved hypothetical protein.
  
     0.458
AEF85803.1
MmoS; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF02743.
     
 0.451
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.