Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84032.1 | AEF84729.1 | TREPR_2900 | TREPR_2898 | Methionine synthase; Identified by match to protein family HMM PF02310. | Methionine synthase; Identified by match to protein family HMM PF00809. | 0.975 |
| AEF84032.1 | AEF85264.1 | TREPR_2900 | TREPR_1556 | Methionine synthase; Identified by match to protein family HMM PF02310. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.833 |
| AEF84032.1 | AEF85965.1 | TREPR_2900 | TREPR_3064 | Methionine synthase; Identified by match to protein family HMM PF02310. | Dihydropteroate synthase DhpS; Identified by match to protein family HMM PF00809. | 0.545 |
| AEF84729.1 | AEF84032.1 | TREPR_2898 | TREPR_2900 | Methionine synthase; Identified by match to protein family HMM PF00809. | Methionine synthase; Identified by match to protein family HMM PF02310. | 0.975 |
| AEF84729.1 | AEF84841.1 | TREPR_2898 | TREPR_3066 | Methionine synthase; Identified by match to protein family HMM PF00809. | CO dehydrogenase/acetyl-CoA synthase delta subunit. | 0.958 |
| AEF84729.1 | AEF85163.1 | TREPR_2898 | TREPR_3402 | Methionine synthase; Identified by match to protein family HMM PF00809. | Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | 0.977 |
| AEF84729.1 | AEF85264.1 | TREPR_2898 | TREPR_1556 | Methionine synthase; Identified by match to protein family HMM PF00809. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.912 |
| AEF84729.1 | AEF85965.1 | TREPR_2898 | TREPR_3064 | Methionine synthase; Identified by match to protein family HMM PF00809. | Dihydropteroate synthase DhpS; Identified by match to protein family HMM PF00809. | 0.922 |
| AEF84729.1 | AEF85971.1 | TREPR_2898 | TREPR_3067 | Methionine synthase; Identified by match to protein family HMM PF00809. | Acetyl-CoA synthase; Identified by match to protein family HMM PF03598; match to protein family HMM TIGR00316. | 0.953 |
| AEF84729.1 | AEF86168.1 | TREPR_2898 | TREPR_0755 | Methionine synthase; Identified by match to protein family HMM PF00809. | Dimethylamine corrinoid protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | 0.977 |
| AEF84729.1 | AEF86217.1 | TREPR_2898 | TREPR_1555 | Methionine synthase; Identified by match to protein family HMM PF00809. | Dimethylamine corrinoid protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | 0.977 |
| AEF84729.1 | AEF86233.1 | TREPR_2898 | TREPR_3065 | Methionine synthase; Identified by match to protein family HMM PF00809. | Acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | 0.964 |
| AEF84729.1 | AEF87043.1 | TREPR_2898 | TREPR_2905 | Methionine synthase; Identified by match to protein family HMM PF00809. | Methionine synthase; Identified by match to protein family HMM PF02310. | 0.799 |
| AEF84841.1 | AEF84729.1 | TREPR_3066 | TREPR_2898 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Methionine synthase; Identified by match to protein family HMM PF00809. | 0.958 |
| AEF84841.1 | AEF85264.1 | TREPR_3066 | TREPR_1556 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.969 |
| AEF84841.1 | AEF85965.1 | TREPR_3066 | TREPR_3064 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Dihydropteroate synthase DhpS; Identified by match to protein family HMM PF00809. | 0.994 |
| AEF84841.1 | AEF85971.1 | TREPR_3066 | TREPR_3067 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Acetyl-CoA synthase; Identified by match to protein family HMM PF03598; match to protein family HMM TIGR00316. | 0.999 |
| AEF84841.1 | AEF86233.1 | TREPR_3066 | TREPR_3065 | CO dehydrogenase/acetyl-CoA synthase delta subunit. | Acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma; Identified by match to protein family HMM PF03599; match to protein family HMM PF04060. | 0.999 |
| AEF85163.1 | AEF84729.1 | TREPR_3402 | TREPR_2898 | Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | Methionine synthase; Identified by match to protein family HMM PF00809. | 0.977 |
| AEF85163.1 | AEF85264.1 | TREPR_3402 | TREPR_1556 | Cobalamin B12-binding domain protein; Identified by match to protein family HMM PF02310; match to protein family HMM PF02607. | Methyl corrinoid protein; Identified by match to protein family HMM PF00809. | 0.975 |
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