Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF84658.1 | AEF85857.1 | TREPR_2943 | TREPR_2944 | Conserved domain protein; Identified by match to protein family HMM PF01936. | Hypothetical protein; Identified by glimmer; putative. | 0.625 |
| AEF84658.1 | AEF86235.1 | TREPR_2943 | TREPR_2945 | Conserved domain protein; Identified by match to protein family HMM PF01936. | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | 0.627 |
| AEF84658.1 | AEF86398.1 | TREPR_2943 | TREPR_2946 | Conserved domain protein; Identified by match to protein family HMM PF01936. | Sulfate permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.451 |
| AEF84658.1 | AEF86615.1 | TREPR_2943 | TREPR_2941 | Conserved domain protein; Identified by match to protein family HMM PF01936. | Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. | 0.509 |
| AEF84658.1 | trmB | TREPR_2943 | TREPR_2641 | Conserved domain protein; Identified by match to protein family HMM PF01936. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.653 |
| AEF85857.1 | AEF84658.1 | TREPR_2944 | TREPR_2943 | Hypothetical protein; Identified by glimmer; putative. | Conserved domain protein; Identified by match to protein family HMM PF01936. | 0.625 |
| AEF85857.1 | AEF86235.1 | TREPR_2944 | TREPR_2945 | Hypothetical protein; Identified by glimmer; putative. | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | 0.819 |
| AEF85857.1 | AEF86398.1 | TREPR_2944 | TREPR_2946 | Hypothetical protein; Identified by glimmer; putative. | Sulfate permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.546 |
| AEF85857.1 | AEF86615.1 | TREPR_2944 | TREPR_2941 | Hypothetical protein; Identified by glimmer; putative. | Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. | 0.422 |
| AEF86235.1 | AEF84658.1 | TREPR_2945 | TREPR_2943 | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Conserved domain protein; Identified by match to protein family HMM PF01936. | 0.627 |
| AEF86235.1 | AEF85857.1 | TREPR_2945 | TREPR_2944 | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Hypothetical protein; Identified by glimmer; putative. | 0.819 |
| AEF86235.1 | AEF86398.1 | TREPR_2945 | TREPR_2946 | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Sulfate permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | 0.559 |
| AEF86235.1 | AEF86615.1 | TREPR_2945 | TREPR_2941 | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. | 0.422 |
| AEF86398.1 | AEF84658.1 | TREPR_2946 | TREPR_2943 | Sulfate permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | Conserved domain protein; Identified by match to protein family HMM PF01936. | 0.451 |
| AEF86398.1 | AEF85857.1 | TREPR_2946 | TREPR_2944 | Sulfate permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | Hypothetical protein; Identified by glimmer; putative. | 0.546 |
| AEF86398.1 | AEF86235.1 | TREPR_2946 | TREPR_2945 | Sulfate permease; Identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740. | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | 0.559 |
| AEF86615.1 | AEF84658.1 | TREPR_2941 | TREPR_2943 | Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. | Conserved domain protein; Identified by match to protein family HMM PF01936. | 0.509 |
| AEF86615.1 | AEF85857.1 | TREPR_2941 | TREPR_2944 | Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. | Hypothetical protein; Identified by glimmer; putative. | 0.422 |
| AEF86615.1 | AEF86235.1 | TREPR_2941 | TREPR_2945 | Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672. | DNA or RNA helicase of superfamily II; Identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851. | 0.422 |
| trmB | AEF84658.1 | TREPR_2641 | TREPR_2943 | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Conserved domain protein; Identified by match to protein family HMM PF01936. | 0.653 |