Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEF83994.1 | AEF84312.1 | TREPR_0466 | TREPR_2951 | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | 0.930 |
| AEF83994.1 | AEF84993.1 | TREPR_0466 | TREPR_0467 | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | Cellobiose PTS system EIIB component; Identified by match to protein family HMM PF02302. | 0.999 |
| AEF83994.1 | AEF85941.1 | TREPR_0466 | TREPR_2965 | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | Pts system mannitol-specific eiicba component; Identified by match to protein family HMM PF00359. | 0.424 |
| AEF83994.1 | AEF86116.1 | TREPR_0466 | TREPR_0489 | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | PTS system, IIA component; Identified by match to protein family HMM PF00359. | 0.427 |
| AEF83994.1 | AEF86442.1 | TREPR_0466 | TREPR_2968 | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | Pts system mannitol-specific eiicba component; Identified by match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00851. | 0.424 |
| AEF83994.1 | AEF86532.1 | TREPR_0466 | TREPR_2954 | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | 0.861 |
| AEF83994.1 | ptsP_4 | TREPR_0466 | TREPR_0463 | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.425 |
| AEF84312.1 | AEF83994.1 | TREPR_2951 | TREPR_0466 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | 0.930 |
| AEF84312.1 | AEF84993.1 | TREPR_2951 | TREPR_0467 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Cellobiose PTS system EIIB component; Identified by match to protein family HMM PF02302. | 0.904 |
| AEF84312.1 | AEF85941.1 | TREPR_2951 | TREPR_2965 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Pts system mannitol-specific eiicba component; Identified by match to protein family HMM PF00359. | 0.983 |
| AEF84312.1 | AEF86116.1 | TREPR_2951 | TREPR_0489 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | PTS system, IIA component; Identified by match to protein family HMM PF00359. | 0.907 |
| AEF84312.1 | AEF86442.1 | TREPR_2951 | TREPR_2968 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Pts system mannitol-specific eiicba component; Identified by match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00851. | 0.983 |
| AEF84312.1 | AEF86532.1 | TREPR_2951 | TREPR_2954 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | PTS system beta-glucoside-specific EIIBCA component; Identified by match to protein family HMM PF00358; match to protein family HMM PF00367; match to protein family HMM PF02378; match to protein family HMM TIGR00830. | 0.995 |
| AEF84312.1 | ptsP_1 | TREPR_2951 | TREPR_3189 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.968 |
| AEF84312.1 | ptsP_2 | TREPR_2951 | TREPR_2962 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.970 |
| AEF84312.1 | ptsP_3 | TREPR_2951 | TREPR_2950 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.993 |
| AEF84312.1 | ptsP_4 | TREPR_2951 | TREPR_0463 | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.968 |
| AEF84993.1 | AEF83994.1 | TREPR_0467 | TREPR_0466 | Cellobiose PTS system EIIB component; Identified by match to protein family HMM PF02302. | Lichenan-specific phosphotransferase enzyme iia component; Identified by match to protein family HMM PF02255. | 0.999 |
| AEF84993.1 | AEF84312.1 | TREPR_0467 | TREPR_2951 | Cellobiose PTS system EIIB component; Identified by match to protein family HMM PF02302. | Phosphocarrier protein HPr; Identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003. | 0.904 |
| AEF84993.1 | AEF85941.1 | TREPR_0467 | TREPR_2965 | Cellobiose PTS system EIIB component; Identified by match to protein family HMM PF02302. | Pts system mannitol-specific eiicba component; Identified by match to protein family HMM PF00359. | 0.723 |
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