STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF84788.1Beta-galactosidase; Identified by match to protein family HMM PF01301. (785 aa)    
Predicted Functional Partners:
AEF84878.1
Identified by match to protein family HMM PF01547.
 
  
 0.844
AEF85330.1
Beta-mannosidase; Identified by match to protein family HMM PF02837.
 
 
 
 0.795
AEF84178.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    0.789
AEF85787.1
ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
  
 0.780
AEF83582.1
Identified by match to protein family HMM PF00759.
 
  
 0.718
AEF83821.1
DgoA protein; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.
 
     0.696
AEF84706.1
Ankyrin repeat protein; Identified by match to protein family HMM PF00023.
  
 0.680
AEF86947.1
Putative ankyrin; Identified by match to protein family HMM PF00023.
  
 0.678
AEF84583.1
Cellobiose phosphorylase; Identified by match to protein family HMM PF06165; match to protein family HMM PF06205.
 
   
 0.556
AEF86905.1
Beta-1,4-xylosidase with transcriptional regulator of AraC/XylS family; Identified by match to protein family HMM PF00165; match to protein family HMM PF01229; match to protein family HMM PF02311; match to protein family HMM PF05899; match to protein family HMM PF07883.
 
   
 0.551
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.