STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEF86381.1D-xylose-binding protein. (372 aa)    
Predicted Functional Partners:
AEF85784.1
Hypothetical protein; Identified by glimmer; putative.
 
  
 0.949
AEF83640.1
Two-component response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00165.
 
     0.921
AEF84400.1
Putative histidine kinase internal region; Identified by match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF06580.
 
     0.911
AEF83829.1
L-arabinose ABC transporter; Identified by match to protein family HMM PF02653; Belongs to the binding-protein-dependent transport system permease family.
  
 0.882
AEF85191.1
Xylose import ATP-binding protein XylG; Identified by match to protein family HMM PF00005.
 
  
 0.830
AEF85392.1
Hypothetical protein; Identified by glimmer; putative.
       0.773
AEF85733.1
ABC transporter.
 
    
0.743
AEF83624.1
Putative extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547.
  
  
 0.558
xylA
Xylose isomerase; Identified by match to protein family HMM PF01261; match to protein family HMM TIGR02630; Belongs to the xylose isomerase family.
 
  
 0.555
AEF84862.1
Putative bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547.
  
  
 0.531
Your Current Organism:
Treponema primitia ZAS2
NCBI taxonomy Id: 545694
Other names: T. primitia ZAS-2, Treponema primitia ZAS-2, Treponema primitia str. ZAS-2, Treponema primitia strain ZAS-2, Treponema sp. ZAS-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.